PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004493550.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 276aa    MW: 31393.7 Da    PI: 9.2943
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004493550.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.38.6e-06236260730
                     HHHHHHHHHHHHHHHHHHCTSCC.C CS
             HLH   7 erErrRRdriNsafeeLrellPk.a 30 
                      +Er RR ri +++ +L+el+P+ +
  XP_004493550.1 236 VAERVRRTRISDRMRKLQELVPNiD 260
                     68********************854 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.67229276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.98E-6232261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-5234260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    Send to blast
MDLNSRYQHN QPNSGLLRFR SNFKQPKAAA ANDEPDSLLL RFTNTANTSS TFPEFFPHNK  60
GHNDPSSLSL LHTNSHQGYT TSSASHFSNF ISFRNAYDTM KGVENYDEVN DSDGELTLSM  120
NILNNQIGFS PKSPSSLRML SQNSKMGNVG IATISRDDRR QQDGNDDAQY YGHKFVYDSN  180
DQNVELGNQI DTLSHNLSLQ RKSSEMFVVE NLLQFPDSVP SSIRAKRGFA THPRSVAERV  240
RRTRISDRMR KLQELVPNID KFIGSKLAHQ TCWIWR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1411141e-76AC141114.14 Medicago truncatula clone mth2-8g20, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004493550.10.0PREDICTED: transcription factor bHLH130-like isoform X2
TrEMBLG7KUF71e-117G7KUF7_MEDTR; Transcription factor bHLH122-like protein
STRINGGLYMA03G29750.44e-72(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-29bHLH family protein